Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 KRT17P7-201ENST00000451704 1104 ntBASIC12.78□□□□□ -0.36
C11orf88Q6PI97 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 AC140912.1-201ENST00000577171 1054 ntBASIC12.78□□□□□ -0.36
C11orf88Q6PI97 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 AL844908.2-201ENST00000609461 460 ntBASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.77□□□□□ -0.36
C11orf88Q6PI97 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 POM121L4P-202ENST00000427789 1891 ntBASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 GK-202ENST00000378941 458 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 RN7SL692P-201ENST00000464677 288 ntBASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SDHAP3-202ENST00000515467 728 ntBASIC12.77□□□□□ -0.37
C11orf88Q6PI97 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.77□□□□□ -0.37
C11orf88Q6PI97 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf88Q6PI97 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms