Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC092580.1-201ENST00000433998 658 ntBASIC17.18■□□□□ 0.34
CTR9Q6PD62 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC116345.2-201ENST00000512837 523 ntBASIC17.18■□□□□ 0.34
CTR9Q6PD62 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AC090386.2-201ENST00000623010 1039 ntBASIC17.18■□□□□ 0.34
CTR9Q6PD62 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC090505.1-201ENST00000430515 1834 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 RNA5SP359-201ENST00000364838 113 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 POU5F1P2-201ENST00000521750 823 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC134698.3-201ENST00000523880 214 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 RTN3P1-201ENST00000536295 711 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC242376.1-201ENST00000559033 726 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 MIR4754-201ENST00000582477 89 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 AL133499.1-201ENST00000596207 608 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 FRMPD2B-201ENST00000431305 1347 ntBASIC17.17■□□□□ 0.34
CTR9Q6PD62 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTR9Q6PD62 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTR9Q6PD62 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms