Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AL096828.3-201ENST00000615354 462 ntBASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AL133466.1-201ENST00000447582 150 ntBASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AC008267.1-201ENST00000474858 1069 ntBASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 DUX4L46-201ENST00000566845 751 ntBASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 AL451050.2-201ENST00000606967 682 ntBASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC4Q5GLZ8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms