Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 AC097065.1-201ENST00000425737 517 ntBASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SHROOM1Q2M3G4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SHROOM1Q2M3G4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 AP003398.1-201ENST00000531124 318 ntBASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL357P-201ENST00000581065 298 ntBASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 SIGLEC22P-201ENST00000599104 714 ntBASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 AC007250.1-201ENST00000608934 338 ntBASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 AC006158.1-201ENST00000610661 249 ntBASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms