Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.64■□□□□ 0.42
DDR1Q08345 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DDR1Q08345 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 CDCA4P4-201ENST00000435216 680 ntBASIC17.64■□□□□ 0.41
DDR1Q08345 NRADDP-201ENST00000437305 691 ntBASIC17.64■□□□□ 0.41
DDR1Q08345 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.64■□□□□ 0.41
DDR1Q08345 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.64■□□□□ 0.41
DDR1Q08345 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.64■□□□□ 0.41
DDR1Q08345 GGNBP1-204ENST00000613113 887 ntBASIC17.64■□□□□ 0.41
DDR1Q08345 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.64■□□□□ 0.41
DDR1Q08345 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDR1Q08345 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 AC027612.2-202ENST00000445955 1199 ntBASIC17.63■□□□□ 0.41
DDR1Q08345 ALG1L7P-201ENST00000502317 768 ntBASIC17.63■□□□□ 0.41
DDR1Q08345 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.63■□□□□ 0.41
DDR1Q08345 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.63■□□□□ 0.41
DDR1Q08345 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.63■□□□□ 0.41
DDR1Q08345 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDR1Q08345 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDR1Q08345 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DDR1Q08345 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.62■□□□□ 0.41
DDR1Q08345 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.62■□□□□ 0.41
DDR1Q08345 BAK1P2-201ENST00000532665 631 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 AL359219.1-201ENST00000556311 934 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.62■□□□□ 0.41
DDR1Q08345 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.62■□□□□ 0.41
DDR1Q08345 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 TYMSP2-201ENST00000589501 424 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.62■□□□□ 0.41
DDR1Q08345 AC011462.4-201ENST00000616866 449 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms