Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC079781.5-202ENST00000641784 3743 ntBASIC12.67□□□□□ -0.38
HIST1H3AP68431 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 YBX1P6-201ENST00000442962 1002 ntBASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC022210.1-201ENST00000449856 793 ntBASIC12.67□□□□□ -0.38
HIST1H3AP68431 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AC009884.2-201ENST00000603110 324 ntBASIC12.67□□□□□ -0.38
HIST1H3AP68431 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 LAP3P2-201ENST00000454686 1454 ntBASIC12.66□□□□□ -0.38
HIST1H3AP68431 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC003686.1-201ENST00000550956 1034 ntBASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC100827.2-201ENST00000563214 1194 ntBASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AL731571.1-201ENST00000617058 5428 ntBASIC12.66□□□□□ -0.38
HIST1H3AP68431 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H3AP68431 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H3AP68431 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms