Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SEC61A1P61619 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 KRT43P-201ENST00000434019 910 ntBASIC12.81□□□□□ -0.36
SEC61A1P61619 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 AL355864.2-201ENST00000447420 863 ntBASIC12.81□□□□□ -0.36
SEC61A1P61619 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.81□□□□□ -0.36
SEC61A1P61619 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.81□□□□□ -0.36
SEC61A1P61619 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 AC016397.2-201ENST00000624848 1985 ntBASIC12.81□□□□□ -0.36
SEC61A1P61619 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 AC007787.1-201ENST00000588095 1583 ntBASIC12.81□□□□□ -0.36
SEC61A1P61619 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61A1P61619 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61A1P61619 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61A1P61619 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SEC61A1P61619 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.8□□□□□ -0.36
SEC61A1P61619 AC004241.5-201ENST00000623870 2448 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SEC61A1P61619 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.8□□□□□ -0.36
SEC61A1P61619 AC005229.1-201ENST00000392885 409 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 CTBP2P5-201ENST00000454986 1264 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 FTH1P14-201ENST00000482930 551 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SEC61A1P61619 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.8□□□□□ -0.36
SEC61A1P61619 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.8□□□□□ -0.36
SEC61A1P61619 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.8□□□□□ -0.36
SEC61A1P61619 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 BEND3P3-201ENST00000611030 2440 ntBASIC12.8□□□□□ -0.36
SEC61A1P61619 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC61A1P61619 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61A1P61619 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms