Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 RN7SL574P-201ENST00000581512 297 ntBASIC16.65■□□□□ 0.26
CHMP4BP1P59074 MIR4706-201ENST00000582134 82 ntBASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AL136295.7-201ENST00000619226 1200 ntBASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP4BP1P59074 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP4BP1P59074 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 FXNP2-201ENST00000411625 547 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC090857.1-201ENST00000527400 390 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 DUX4L46-201ENST00000566845 751 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC009955.4-201ENST00000597192 544 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC138696.2-201ENST00000607376 223 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC079336.7-201ENST00000623428 1078 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC100757.4-201ENST00000626934 759 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC068587.8-201ENST00000641239 219 ntBASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP4BP1P59074 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms