Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
GFRA1P56159 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.93□□□□□ -0.34
GFRA1P56159 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 RPS9P1-201ENST00000419943 583 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 AC026320.2-201ENST00000434379 478 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 CEP164P1-201ENST00000455142 418 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 RNA5SP423-201ENST00000517127 109 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.93□□□□□ -0.34
GFRA1P56159 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 AL133499.1-201ENST00000596207 608 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.93□□□□□ -0.34
GFRA1P56159 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 TBC1D3J-201ENST00000620719 1426 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
GFRA1P56159 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 AC012617.1-204ENST00000586340 2305 ntBASIC12.93□□□□□ -0.34
GFRA1P56159 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
GFRA1P56159 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GFRA1P56159 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 AC005912.2-201ENST00000619492 2400 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 OR2K2-202ENST00000374428 1038 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 RPSAP15-201ENST00000448168 861 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.92□□□□□ -0.34
GFRA1P56159 AC234782.1-201ENST00000451950 919 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.92□□□□□ -0.34
GFRA1P56159 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.92□□□□□ -0.34
GFRA1P56159 KRT8P1-201ENST00000557533 1207 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 AL022313.4-201ENST00000562756 2046 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 MIR3907-201ENST00000579424 151 ntBASIC12.92□□□□□ -0.34
GFRA1P56159 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
GFRA1P56159 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.92□□□□□ -0.34
GFRA1P56159 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.92□□□□□ -0.34
GFRA1P56159 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.92□□□□□ -0.34
GFRA1P56159 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GFRA1P56159 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms