Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC010203.1-204ENST00000548782 407 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX2-5P52952 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC024267.1-201ENST00000582320 895 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC145285.6-201ENST00000604632 637 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 ACTL9-202ENST00000612068 1252 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.28□□□□□ -0.44
NKX2-5P52952 AL645728.2-202ENST00000641679 227 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC005332.1-201ENST00000577698 1310 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 AL360270.3-201ENST00000609118 1348 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 CICP7-201ENST00000432723 2477 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 NBPF17P-201ENST00000401087 2119 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-5P52952 ZNF493-208ENST00000599461 1769 ntBASIC12.28□□□□□ -0.44
NKX2-5P52952 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
NKX2-5P52952 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
NKX2-5P52952 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-5P52952 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-5P52952 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-5P52952 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.27□□□□□ -0.44
NKX2-5P52952 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NKX2-5P52952 CCT7P1-201ENST00000406551 1611 ntBASIC12.27□□□□□ -0.44
NKX2-5P52952 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-5P52952 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NKX2-5P52952 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-5P52952 AL645929.1-201ENST00000420084 975 ntBASIC12.27□□□□□ -0.45
NKX2-5P52952 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX2-5P52952 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NKX2-5P52952 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.27□□□□□ -0.45
NKX2-5P52952 KRT18P8-201ENST00000581937 1246 ntBASIC12.27□□□□□ -0.45
NKX2-5P52952 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
NKX2-5P52952 AC025181.2-201ENST00000606994 802 ntBASIC12.27□□□□□ -0.45
NKX2-5P52952 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-5P52952 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-5P52952 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX2-5P52952 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms