Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 SMCR5-201ENST00000543475 2844 ntBASIC14.24□□□□□ -0.13
GTF2A1P52655 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 PMS2P4-201ENST00000412466 1052 ntBASIC14.24□□□□□ -0.13
GTF2A1P52655 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 AP002469.2-201ENST00000531724 424 ntBASIC14.24□□□□□ -0.13
GTF2A1P52655 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.24□□□□□ -0.13
GTF2A1P52655 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
GTF2A1P52655 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 AGGF1P1-201ENST00000509500 2073 ntBASIC14.24□□□□□ -0.13
GTF2A1P52655 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.24□□□□□ -0.13
GTF2A1P52655 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GTF2A1P52655 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC14.24□□□□□ -0.13
GTF2A1P52655 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GTF2A1P52655 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GTF2A1P52655 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.23□□□□□ -0.13
GTF2A1P52655 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.23□□□□□ -0.13
GTF2A1P52655 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GTF2A1P52655 MIR3909-201ENST00000579518 119 ntBASIC14.23□□□□□ -0.13
GTF2A1P52655 CLEC4GP1-201ENST00000596555 870 ntBASIC14.23□□□□□ -0.13
GTF2A1P52655 AL356488.2-201ENST00000602755 427 ntBASIC14.23□□□□□ -0.13
GTF2A1P52655 AC010503.4-201ENST00000615487 688 ntBASIC14.23□□□□□ -0.13
GTF2A1P52655 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.23□□□□□ -0.13
GTF2A1P52655 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC14.23□□□□□ -0.13
GTF2A1P52655 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GTF2A1P52655 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms