Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CD97P48960 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD97P48960 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD97P48960 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.08□□□□□ -0.16
CD97P48960 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
CD97P48960 AC127383.1-201ENST00000444697 1800 ntBASIC14.08□□□□□ -0.16
CD97P48960 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.08□□□□□ -0.16
CD97P48960 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CD97P48960 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD97P48960 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD97P48960 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.08□□□□□ -0.16
CD97P48960 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD97P48960 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 TRIM80P-201ENST00000455685 2848 ntBASIC14.07□□□□□ -0.16
CD97P48960 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 MIR33B-201ENST00000385104 96 ntBASIC14.07□□□□□ -0.16
CD97P48960 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.07□□□□□ -0.16
CD97P48960 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 IMP3P2-201ENST00000489760 475 ntBASIC14.07□□□□□ -0.16
CD97P48960 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.07□□□□□ -0.16
CD97P48960 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.07□□□□□ -0.16
CD97P48960 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 POM121L4P-202ENST00000427789 1891 ntBASIC14.07□□□□□ -0.16
CD97P48960 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD97P48960 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD97P48960 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD97P48960 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD97P48960 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.06□□□□□ -0.16
CD97P48960 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD97P48960 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.06□□□□□ -0.16
CD97P48960 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CD97P48960 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.06□□□□□ -0.16
CD97P48960 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
CD97P48960 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD97P48960 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
CD97P48960 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.06□□□□□ -0.16
CD97P48960 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.06□□□□□ -0.16
CD97P48960 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.06□□□□□ -0.16
CD97P48960 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD97P48960 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.06□□□□□ -0.16
CD97P48960 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.06□□□□□ -0.16
CD97P48960 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms