Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ARCN1P48444 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ARCN1P48444 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ARCN1P48444 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ARCN1P48444 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.52□□□□□ -0.08
ARCN1P48444 AL008718.2-201ENST00000609206 1313 ntBASIC14.52□□□□□ -0.08
ARCN1P48444 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.52□□□□□ -0.08
ARCN1P48444 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.52□□□□□ -0.09
ARCN1P48444 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.52□□□□□ -0.09
ARCN1P48444 DUX4L45-201ENST00000566406 1057 ntBASIC14.52□□□□□ -0.09
ARCN1P48444 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.52□□□□□ -0.09
ARCN1P48444 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.52□□□□□ -0.09
ARCN1P48444 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.52□□□□□ -0.09
ARCN1P48444 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.52□□□□□ -0.09
ARCN1P48444 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ARCN1P48444 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ARCN1P48444 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ARCN1P48444 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.52□□□□□ -0.09
ARCN1P48444 AL023775.1-201ENST00000454907 1746 ntBASIC14.52□□□□□ -0.09
ARCN1P48444 AC244394.1-201ENST00000435000 1665 ntBASIC14.52□□□□□ -0.09
ARCN1P48444 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ARCN1P48444 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 AL359183.1-201ENST00000623796 2132 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ARCN1P48444 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 SBF1P1-201ENST00000444527 5631 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 TUBB1P2-201ENST00000422712 1306 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 TUBB1P1-201ENST00000503144 1300 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ARCN1P48444 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.51□□□□□ -0.09
ARCN1P48444 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 ACTBP11-201ENST00000436287 1126 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.51□□□□□ -0.09
ARCN1P48444 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ARCN1P48444 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
ARCN1P48444 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.51□□□□□ -0.09
ARCN1P48444 MIR6720-201ENST00000611664 98 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 AC091271.1-201ENST00000611877 1162 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.51□□□□□ -0.09
ARCN1P48444 AC111170.3-201ENST00000624282 2464 ntBASIC14.51□□□□□ -0.09
ARCN1P48444 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.51□□□□□ -0.09
ARCN1P48444 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARCN1P48444 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.5□□□□□ -0.09
ARCN1P48444 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.5□□□□□ -0.09
ARCN1P48444 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.5□□□□□ -0.09
ARCN1P48444 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.5□□□□□ -0.09
ARCN1P48444 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.5□□□□□ -0.09
ARCN1P48444 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.5□□□□□ -0.09
ARCN1P48444 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARCN1P48444 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ARCN1P48444 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms