Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC089987.1-201ENST00000551654 2209 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC092580.1-201ENST00000433998 658 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 POM121L10P-201ENST00000436994 1285 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 AL512310.5-201ENST00000551999 515 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC130686.1-201ENST00000622936 2466 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC6A12P48065 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC004899.1-201ENST00000424687 1714 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC6A12P48065 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC6A12P48065 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 AC140658.4-201ENST00000561990 352 ntBASIC13.92□□□□□ -0.18
SLC6A12P48065 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC6A12P48065 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CICP4-201ENST00000447359 2812 ntBASIC13.92□□□□□ -0.18
SLC6A12P48065 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC6A12P48065 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC6A12P48065 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC6A12P48065 AP002353.1-201ENST00000528257 1599 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms