Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.91□□□□□ -0.5
CEACAM3P40198 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.91□□□□□ -0.5
CEACAM3P40198 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.91□□□□□ -0.5
CEACAM3P40198 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC139749.1-202ENST00000617529 3139 ntBASIC11.91□□□□□ -0.5
CEACAM3P40198 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CEACAM3P40198 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 RPL13AP20-201ENST00000459725 609 ntBASIC11.9□□□□□ -0.5
CEACAM3P40198 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.9□□□□□ -0.5
CEACAM3P40198 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 MIR6720-201ENST00000611664 98 ntBASIC11.9□□□□□ -0.5
CEACAM3P40198 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.9□□□□□ -0.5
CEACAM3P40198 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CEACAM3P40198 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 KRT8P28-201ENST00000433288 1390 ntBASIC11.9□□□□□ -0.5
CEACAM3P40198 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.9□□□□□ -0.5
CEACAM3P40198 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.9□□□□□ -0.51
CEACAM3P40198 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
CEACAM3P40198 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
CEACAM3P40198 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CEACAM3P40198 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.89□□□□□ -0.51
CEACAM3P40198 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.89□□□□□ -0.51
CEACAM3P40198 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.89□□□□□ -0.51
CEACAM3P40198 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.89□□□□□ -0.51
CEACAM3P40198 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CEACAM3P40198 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 AC015802.1-201ENST00000588104 1449 ntBASIC11.89□□□□□ -0.51
CEACAM3P40198 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CEACAM3P40198 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms