Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 DDC-213ENST00000617822 1809 ntTSL 3 BASIC21.03■□□□□ 0.96
DNMT1P26358 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 TCAM1P-207ENST00000485295 1537 ntBASIC21.03■□□□□ 0.96
DNMT1P26358 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DNMT1P26358 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
DNMT1P26358 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC21.03■□□□□ 0.96
DNMT1P26358 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 CD44-224ENST00000526669 870 ntTSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 TREHP1-201ENST00000531328 465 ntBASIC21.03■□□□□ 0.96
DNMT1P26358 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNMT1P26358 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
DNMT1P26358 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNMT1P26358 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 AC093462.1-201ENST00000621167 1683 ntBASIC21.02■□□□□ 0.96
DNMT1P26358 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DNMT1P26358 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.02■□□□□ 0.96
DNMT1P26358 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.02■□□□□ 0.96
DNMT1P26358 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC21.02■□□□□ 0.96
DNMT1P26358 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNMT1P26358 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.02■□□□□ 0.96
DNMT1P26358 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC21.02■□□□□ 0.95
DNMT1P26358 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC21.01■□□□□ 0.95
DNMT1P26358 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 ACTBP14-201ENST00000411655 1089 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 PSAT1P2-201ENST00000426107 972 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.01■□□□□ 0.95
DNMT1P26358 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.01■□□□□ 0.95
DNMT1P26358 IGHEP1-201ENST00000521393 651 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.01■□□□□ 0.95
DNMT1P26358 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 CYP4F36P-201ENST00000589193 186 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
DNMT1P26358 GOLGA8EP-201ENST00000530246 1959 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 AC089987.1-201ENST00000551654 2209 ntBASIC21.01■□□□□ 0.95
DNMT1P26358 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC21.01■□□□□ 0.95
DNMT1P26358 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
DNMT1P26358 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DNMT1P26358 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC21.01■□□□□ 0.95
DNMT1P26358 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNMT1P26358 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21■□□□□ 0.95
DNMT1P26358 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms