Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.34□□□□□ -0.43
HIST1H1DP16402 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.34□□□□□ -0.43
HIST1H1DP16402 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 AL691403.2-201ENST00000618460 490 ntBASIC12.34□□□□□ -0.43
HIST1H1DP16402 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1DP16402 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H1DP16402 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.33□□□□□ -0.43
HIST1H1DP16402 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H1DP16402 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 POM121L8P-201ENST00000417732 1281 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 POM121L9P-203ENST00000441984 1285 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AC022137.2-201ENST00000503482 481 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 FTLP10-202ENST00000505798 471 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AC123567.1-201ENST00000548294 1261 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 CLUHP6-201ENST00000580789 941 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 AC092053.3-201ENST00000641308 4975 ntBASIC12.33□□□□□ -0.44
HIST1H1DP16402 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H1DP16402 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms