Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 AC016397.2-201ENST00000624848 1985 ntBASIC15.9■□□□□ 0.14
KRT13P13646 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT13P13646 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT13P13646 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT13P13646 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.9■□□□□ 0.14
KRT13P13646 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
KRT13P13646 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 AC064801.2-201ENST00000625052 1303 ntBASIC15.9■□□□□ 0.14
KRT13P13646 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
KRT13P13646 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT13P13646 HSPA8P5-201ENST00000456928 2069 ntBASIC15.9■□□□□ 0.14
KRT13P13646 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT13P13646 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
KRT13P13646 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 TCAM1P-207ENST00000485295 1537 ntBASIC15.89■□□□□ 0.13
KRT13P13646 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 AC100827.2-201ENST00000563214 1194 ntBASIC15.89■□□□□ 0.13
KRT13P13646 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT13P13646 AC010328.2-201ENST00000597698 1111 ntBASIC15.89■□□□□ 0.13
KRT13P13646 MIR6720-201ENST00000611664 98 ntBASIC15.89■□□□□ 0.13
KRT13P13646 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT13P13646 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KRT13P13646 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT13P13646 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT13P13646 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT13P13646 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT13P13646 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT13P13646 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT13P13646 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT13P13646 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms