Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB1P11230 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB1P11230 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB1P11230 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB1P11230 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB1P11230 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CHRNB1P11230 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 PPT1-215ENST00000641471 2368 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 MIR645-201ENST00000385283 94 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRNB1P11230 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRNB1P11230 RN7SL596P-201ENST00000582123 288 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
CHRNB1P11230 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 AC140113.1-201ENST00000603467 169 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 AC244250.3-201ENST00000620749 366 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 AC073592.2-201ENST00000623062 780 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 AC002472.4-201ENST00000641915 272 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 AC006504.5-208ENST00000588784 2401 ntBASIC14.65□□□□□ -0.06
CHRNB1P11230 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB1P11230 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB1P11230 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB1P11230 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
CHRNB1P11230 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CHRNB1P11230 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 RN7SKP109-201ENST00000410592 316 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB1P11230 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB1P11230 AC092580.1-201ENST00000433998 658 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 RPL35P9-201ENST00000446059 350 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 AC018638.5-201ENST00000450885 754 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB1P11230 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms