Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.95□□□□□ -0.18
SP9P0CG40 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SP9P0CG40 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.95□□□□□ -0.18
SP9P0CG40 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SP9P0CG40 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SP9P0CG40 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.94□□□□□ -0.18
SP9P0CG40 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 AC006328.1-201ENST00000437571 379 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.94□□□□□ -0.18
SP9P0CG40 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 AC099328.1-201ENST00000498809 1030 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 AC084262.1-201ENST00000567818 751 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 NF1P11-201ENST00000621292 1282 ntBASIC13.94□□□□□ -0.18
SP9P0CG40 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.94□□□□□ -0.18
SP9P0CG40 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SP9P0CG40 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SP9P0CG40 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.94□□□□□ -0.18
SP9P0CG40 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.94□□□□□ -0.18
SP9P0CG40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.93□□□□□ -0.18
SP9P0CG40 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.93□□□□□ -0.18
SP9P0CG40 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 KRT18P44-201ENST00000416086 1285 ntBASIC13.93□□□□□ -0.18
SP9P0CG40 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 AC092810.2-201ENST00000431570 362 ntBASIC13.93□□□□□ -0.18
SP9P0CG40 SAP18P2-201ENST00000434334 459 ntBASIC13.93□□□□□ -0.18
SP9P0CG40 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.93□□□□□ -0.18
SP9P0CG40 RN7SL838P-201ENST00000481676 295 ntBASIC13.93□□□□□ -0.18
SP9P0CG40 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 GRAMD4P6-201ENST00000556999 244 ntBASIC13.93□□□□□ -0.18
SP9P0CG40 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.93□□□□□ -0.18
SP9P0CG40 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.93□□□□□ -0.18
SP9P0CG40 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.93□□□□□ -0.18
SP9P0CG40 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SP9P0CG40 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.93□□□□□ -0.18
SP9P0CG40 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.93□□□□□ -0.18
SP9P0CG40 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SP9P0CG40 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.93□□□□□ -0.18
SP9P0CG40 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms