Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SCARNA21-201ENST00000517026 139 ntBASIC15.91■□□□□ 0.14
CLTAP09496 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.91■□□□□ 0.14
CLTAP09496 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.91■□□□□ 0.14
CLTAP09496 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.91■□□□□ 0.14
CLTAP09496 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 AC015802.1-201ENST00000588104 1449 ntBASIC15.91■□□□□ 0.14
CLTAP09496 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.91■□□□□ 0.14
CLTAP09496 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.91■□□□□ 0.14
CLTAP09496 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.91■□□□□ 0.14
CLTAP09496 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLTAP09496 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 BX640514.1-201ENST00000583223 1918 ntBASIC15.9■□□□□ 0.14
CLTAP09496 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLTAP09496 AC016700.1-201ENST00000429424 312 ntBASIC15.9■□□□□ 0.14
CLTAP09496 FNTAP2-201ENST00000430308 634 ntBASIC15.9■□□□□ 0.14
CLTAP09496 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 SNORD3B-2-202ENST00000571722 791 ntBASIC15.9■□□□□ 0.14
CLTAP09496 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.9■□□□□ 0.14
CLTAP09496 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLTAP09496 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.9■□□□□ 0.14
CLTAP09496 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLTAP09496 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLTAP09496 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.89■□□□□ 0.14
CLTAP09496 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLTAP09496 FAM90A7P-201ENST00000382628 1395 ntBASIC15.89■□□□□ 0.13
CLTAP09496 FAM90A23P-201ENST00000400136 1395 ntBASIC15.89■□□□□ 0.13
CLTAP09496 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.89■□□□□ 0.13
CLTAP09496 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.89■□□□□ 0.13
CLTAP09496 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.89■□□□□ 0.13
CLTAP09496 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.89■□□□□ 0.13
CLTAP09496 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLTAP09496 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.89■□□□□ 0.13
CLTAP09496 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLTAP09496 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 AC022494.1-201ENST00000466044 728 ntBASIC15.89■□□□□ 0.13
CLTAP09496 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 AC006122.1-201ENST00000493323 440 ntBASIC15.89■□□□□ 0.13
CLTAP09496 MARK2P5-201ENST00000507649 634 ntBASIC15.89■□□□□ 0.13
CLTAP09496 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.89■□□□□ 0.13
CLTAP09496 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.89■□□□□ 0.13
CLTAP09496 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.89■□□□□ 0.13
CLTAP09496 AC027237.1-201ENST00000560942 655 ntBASIC15.89■□□□□ 0.13
CLTAP09496 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.89■□□□□ 0.13
CLTAP09496 AL132994.2-201ENST00000603120 687 ntBASIC15.89■□□□□ 0.13
CLTAP09496 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLTAP09496 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.89■□□□□ 0.13
CLTAP09496 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLTAP09496 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms