Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC004923.3-201ENST00000527532 355 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 CSTP2-201ENST00000610599 398 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 AC005746.3-201ENST00000614751 393 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.46■□□□□ 0.55
COL5A2P05997 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 AC090505.1-201ENST00000430515 1834 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.46■□□□□ 0.55
COL5A2P05997 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 AL590824.1-201ENST00000403828 1349 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 AC073347.1-201ENST00000421633 2643 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
COL5A2P05997 MIR1307-201ENST00000408840 149 ntBASIC18.46■□□□□ 0.54
COL5A2P05997 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.46■□□□□ 0.54
COL5A2P05997 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.46■□□□□ 0.54
COL5A2P05997 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.46■□□□□ 0.54
COL5A2P05997 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.46■□□□□ 0.54
COL5A2P05997 CDK4P1-201ENST00000454213 828 ntBASIC18.46■□□□□ 0.54
COL5A2P05997 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
COL5A2P05997 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.46■□□□□ 0.54
COL5A2P05997 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.45■□□□□ 0.54
COL5A2P05997 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.45■□□□□ 0.54
COL5A2P05997 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL5A2P05997 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COL5A2P05997 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC18.45■□□□□ 0.54
COL5A2P05997 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.45■□□□□ 0.54
COL5A2P05997 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC18.45■□□□□ 0.54
COL5A2P05997 TPT1P11-201ENST00000458482 498 ntBASIC18.45■□□□□ 0.54
COL5A2P05997 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 RN7SL524P-201ENST00000581152 300 ntBASIC18.45■□□□□ 0.54
COL5A2P05997 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC18.45■□□□□ 0.54
COL5A2P05997 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL5A2P05997 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
COL5A2P05997 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 GH1-203ENST00000351388 685 ntTSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 AIG1-203ENST00000367596 559 ntTSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 U73169.1-201ENST00000395152 367 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 KRT18P33-201ENST00000398525 1043 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 MAGEA7P-201ENST00000436482 942 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 RN7SL684P-201ENST00000465665 294 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 ALG1L15P-201ENST00000482834 794 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC18.44■□□□□ 0.54
COL5A2P05997 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC18.44■□□□□ 0.54
COL5A2P05997 MIR4326-201ENST00000582203 59 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 AC233280.19-201ENST00000633223 136 ntBASIC18.44■□□□□ 0.54
COL5A2P05997 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
COL5A2P05997 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL5A2P05997 LILRP2-202ENST00000413572 1383 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms