Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC024293.1-201ENST00000467930 498 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AC007952.4-201ENST00000573866 637 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 RN7SL357P-201ENST00000581065 298 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AC009145.4-201ENST00000625119 1294 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 LAP3P2-201ENST00000454686 1454 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC006486.2-201ENST00000624246 2199 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 PYY2-201ENST00000315776 282 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AL139008.1-201ENST00000437894 228 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 RPL35P9-201ENST00000446059 350 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC010234.1-201ENST00000494599 870 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AL022344.2-201ENST00000568976 968 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC073592.2-201ENST00000623062 780 ntBASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC187A0A096LP49 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms