Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 PTGER4P2-201ENST00000328411 252 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 U3.5-201ENST00000363448 216 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 PTGER4P3-201ENST00000458150 252 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 AC100858.1-201ENST00000514059 1228 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 AC005777.1-201ENST00000588332 187 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 AC093462.1-201ENST00000621167 1683 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 BX640514.1-201ENST00000583223 1918 ntBASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHANK2Q9UPX8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 AC079250.1-201ENST00000456046 531 ntBASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 AL359219.1-201ENST00000556311 934 ntBASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SHANK2Q9UPX8 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SHANK2Q9UPX8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC083801.1-201ENST00000491689 358 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC026120.2-201ENST00000617239 309 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 GOLGA8VP-201ENST00000559009 1798 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms