Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC004461.1-201ENST00000412461 403 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC254562.1-201ENST00000417586 456 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 ADH5P3-201ENST00000433842 1137 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AP006288.1-201ENST00000446065 395 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC243562.1-201ENST00000560672 389 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AP001160.2-201ENST00000596071 487 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 PCDHB19P-202ENST00000625133 2914 ntBASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.34□□□□□ -0.43
UBQLN2Q9UHD9 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.43
UBQLN2Q9UHD9 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
UBQLN2Q9UHD9 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC018665.1-201ENST00000622927 1362 ntBASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 SPCS2P4-201ENST00000436160 681 ntBASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AP000344.2-201ENST00000512987 629 ntBASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC004835.2-201ENST00000603762 682 ntBASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBQLN2Q9UHD9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms