Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 AC018629.1-201ENST00000623381 1736 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 DPM3-202ENST00000368399 517 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 RNMTL1P1-201ENST00000454103 560 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 AC126915.1-201ENST00000522847 1038 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 SNORD3B-2-202ENST00000571722 791 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 AL132994.2-201ENST00000603120 687 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 AC005695.3-201ENST00000614522 232 ntBASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KLHL42Q9P2K6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AC092580.1-201ENST00000433998 658 ntBASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KLHL42Q9P2K6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KLHL42Q9P2K6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
KLHL42Q9P2K6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms