Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AC130686.1-201ENST00000622936 2466 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
LIN7CQ9NUP9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 ACTBP8-201ENST00000403258 1108 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC131206.1-201ENST00000538078 1211 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC132938.2-201ENST00000579188 680 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 IGHV3-72-202ENST00000621503 303 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AL035252.4-201ENST00000624174 288 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AL591163.1-201ENST00000641757 987 ntBASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.14□□□□□ -0.47
LIN7CQ9NUP9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC134312.5-201ENST00000568031 1313 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC005229.1-201ENST00000392885 409 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms