Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 SRSF9P1-201ENST00000399149 530 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AL137077.1-201ENST00000442115 528 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 MIR6871-201ENST00000613433 56 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 U3.5-201ENST00000363448 216 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AL391903.1-201ENST00000407513 365 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC139143.1-201ENST00000441772 1207 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CNN2P1-201ENST00000453616 918 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AP001979.1-201ENST00000529222 751 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC010776.3-201ENST00000617349 424 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC13.08□□□□□ -0.32
CHD8Q9HCK8 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CHD8Q9HCK8 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AL031577.1-201ENST00000339867 399 ntBASIC13.07□□□□□ -0.32
CHD8Q9HCK8 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 IFNWP19-201ENST00000438727 566 ntBASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 KRT18P42-201ENST00000505048 1255 ntBASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 AL591471.1-201ENST00000621855 229 ntBASIC13.07□□□□□ -0.32
CHD8Q9HCK8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.07□□□□□ -0.32
CHD8Q9HCK8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 LINC00115-201ENST00000473798 1317 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms