Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 AC073869.1-201ENST00000415574 2762 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AP000437.1-201ENST00000624057 2085 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 MRPS18AP1-201ENST00000414458 589 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 MEP1AP4-201ENST00000423244 1087 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AL391280.1-201ENST00000506969 1062 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC005586.2-201ENST00000563946 837 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC138466.3-201ENST00000619983 221 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AL445250.1-201ENST00000641671 2259 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AL359845.1-201ENST00000458202 1648 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 MKRN5P-201ENST00000445263 1467 ntBASIC16.22■□□□□ 0.19
CBX8Q9HC52 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CBX8Q9HC52 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX8Q9HC52 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 FKBP4P6-201ENST00000457486 1332 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 AL355102.3-201ENST00000554299 1678 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 AC104596.2-201ENST00000512793 793 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 KRT18P8-201ENST00000581937 1246 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 GPALPP1-207ENST00000611650 899 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.21■□□□□ 0.19
CBX8Q9HC52 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX8Q9HC52 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX8Q9HC52 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
CBX8Q9HC52 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CBX8Q9HC52 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CBX8Q9HC52 AC004623.1-201ENST00000624592 2127 ntBASIC16.21■□□□□ 0.18
CBX8Q9HC52 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX8Q9HC52 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CBX8Q9HC52 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX8Q9HC52 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms