Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.83□□□□□ -0.2
CNTNAP3Q9BZ76 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNTNAP3Q9BZ76 AC013268.4-201ENST00000637413 2228 ntBASIC13.83□□□□□ -0.2
CNTNAP3Q9BZ76 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AC144522.1-201ENST00000625111 1658 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 HNRNPABP1-201ENST00000406003 734 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AC104961.1-201ENST00000427605 771 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AC007881.1-201ENST00000437460 187 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 AC023968.2-201ENST00000560593 1049 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 TNRC18P2-201ENST00000417666 2714 ntBASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNTNAP3Q9BZ76 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 SNRPCP15-201ENST00000424055 192 ntBASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AC006328.1-201ENST00000437571 379 ntBASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 RN7SL672P-201ENST00000474091 317 ntBASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 MIR2278-201ENST00000516344 96 ntBASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AC133540.1-201ENST00000620845 1019 ntBASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 AP002414.2-201ENST00000591780 3365 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms