Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 KRT18P25-201ENST00000508931 1278 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AL359711.2-201ENST00000563105 872 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC099568.2-201ENST00000609194 695 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC026271.4-201ENST00000578214 1833 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC022144.1-201ENST00000602255 1580 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 AC004623.1-201ENST00000624592 2127 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 FKBP4P6-201ENST00000457486 1332 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ACKR1-201ENST00000368121 1240 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 MIR8072-201ENST00000614241 80 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 LINC01165-201ENST00000445190 1623 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AP000593.2-201ENST00000542775 1433 ntBASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.19□□□□□ -0.3
GABARAPL3Q9BY60 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABARAPL3Q9BY60 RN7SKP175-201ENST00000408472 289 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms