Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AL645937.2-201ENST00000396808 931 ntBASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AC004066.1-201ENST00000502488 802 ntBASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAF4Q9BUZ4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 TPM3P8-201ENST00000330554 643 ntBASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 MIR1247-201ENST00000408206 136 ntBASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 GOLGA2P4-201ENST00000441462 777 ntBASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AL606495.2-201ENST00000605867 535 ntBASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 LRRC59-203ENST00000576448 1531 ntBASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF4Q9BUZ4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms