Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.43■□□□□ 0.38
EYA3Q99504 LINC00265-2P-201ENST00000413372 782 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 BX679664.3-201ENST00000414070 555 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.43■□□□□ 0.38
EYA3Q99504 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 AC113935.1-201ENST00000471722 555 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 RN7SL564P-201ENST00000496309 250 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.43■□□□□ 0.38
EYA3Q99504 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 AC244250.3-201ENST00000620749 366 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 AC002472.4-201ENST00000641915 272 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.43■□□□□ 0.38
EYA3Q99504 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
EYA3Q99504 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 MYADML-201ENST00000474610 2147 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 NORAD-201ENST00000565493 5339 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 CCT8L1P-201ENST00000465400 1674 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 GRPEL2P1-201ENST00000453145 339 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 AC093909.3-201ENST00000504783 336 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 AC095040.1-201ENST00000513286 675 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.42■□□□□ 0.38
EYA3Q99504 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.42■□□□□ 0.38
EYA3Q99504 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
EYA3Q99504 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 AC025183.3-201ENST00000623526 1482 ntBASIC17.42■□□□□ 0.38
EYA3Q99504 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.42■□□□□ 0.38
EYA3Q99504 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EYA3Q99504 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms