Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP53Q96M91 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP53Q96M91 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP53Q96M91 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CFAP53Q96M91 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 RNA5SP359-201ENST00000364838 113 ntBASIC19.32■□□□□ 0.68
CFAP53Q96M91 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP53Q96M91 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CFAP53Q96M91 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 HSPA8P5-201ENST00000456928 2069 ntBASIC19.31■□□□□ 0.68
CFAP53Q96M91 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC020910.6-201ENST00000623084 1459 ntBASIC19.31■□□□□ 0.68
CFAP53Q96M91 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 RN7SL530P-201ENST00000485097 298 ntBASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CFAP53Q96M91 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP53Q96M91 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 CCT8L1P-201ENST00000465400 1674 ntBASIC19.3■□□□□ 0.68
CFAP53Q96M91 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms