Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC072061.1-201ENST00000569710 2234 ntBASIC16.32■□□□□ 0.2
TNFRSF25Q93038 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 AC138649.2-201ENST00000615886 705 ntBASIC16.32■□□□□ 0.2
TNFRSF25Q93038 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF25Q93038 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 RNA5SP359-201ENST00000364838 113 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 HMGA1P1-201ENST00000415560 1062 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 RPS9P1-201ENST00000419943 583 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 AP001258.2-201ENST00000529891 490 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 AC243960.2-201ENST00000600996 747 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 AC089987.1-201ENST00000551654 2209 ntBASIC16.31■□□□□ 0.2
TNFRSF25Q93038 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF25Q93038 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AC130686.1-201ENST00000622936 2466 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 GPAA1P2-201ENST00000417923 928 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AL596276.2-201ENST00000447525 331 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AL805961.1-203ENST00000641078 1258 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AC010327.5-201ENST00000586923 3061 ntBASIC16.3■□□□□ 0.2
TNFRSF25Q93038 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF25Q93038 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF25Q93038 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms