Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC004522.1-201ENST00000419978 654 ntBASIC17.24■□□□□ 0.35
SNED1Q8TER0 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 ASS1P2-201ENST00000439895 1223 ntBASIC17.24■□□□□ 0.35
SNED1Q8TER0 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC113347.2-201ENST00000512350 279 ntBASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 AC073869.4-201ENST00000620841 800 ntBASIC17.24■□□□□ 0.35
SNED1Q8TER0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 TNRC18P2-201ENST00000417666 2714 ntBASIC17.24■□□□□ 0.35
SNED1Q8TER0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.24■□□□□ 0.35
SNED1Q8TER0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNED1Q8TER0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 AC093300.1-201ENST00000510368 1201 ntBASIC17.23■□□□□ 0.35
SNED1Q8TER0 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 AL031673.1-201ENST00000611460 466 ntBASIC17.23■□□□□ 0.35
SNED1Q8TER0 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNED1Q8TER0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNED1Q8TER0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 AC007952.5-201ENST00000572818 1486 ntBASIC17.22■□□□□ 0.35
SNED1Q8TER0 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 AC092903.1-201ENST00000466506 262 ntBASIC17.22■□□□□ 0.35
SNED1Q8TER0 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.22■□□□□ 0.35
SNED1Q8TER0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 TBC1D27-202ENST00000424239 1573 ntBASIC17.22■□□□□ 0.35
SNED1Q8TER0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNED1Q8TER0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNED1Q8TER0 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SNED1Q8TER0 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNED1Q8TER0 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms