Protein–RNA interactions for Protein: Q8TB73

NDNF, Protein NDNF, humanhuman

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNFQ8TB73 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDNFQ8TB73 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NDNFQ8TB73 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDNFQ8TB73 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.15□□□□□ -0.3
NDNFQ8TB73 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.15□□□□□ -0.31
NDNFQ8TB73 TUBB3P1-201ENST00000405796 1332 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 TUBB8P4-201ENST00000511806 1324 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 MIR193BHG-211ENST00000641433 5365 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 AC027369.3-201ENST00000530465 3707 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 PMS2P2-201ENST00000425039 1128 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AL512356.2-201ENST00000546955 174 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 BX324167.2-201ENST00000623717 3316 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 AC115284.2-201ENST00000624646 2054 ntBASIC13.14□□□□□ -0.31
NDNFQ8TB73 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.14□□□□□ -0.31
NDNFQ8TB73 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDNFQ8TB73 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 MARK2P9-201ENST00000430958 1727 ntBASIC13.13□□□□□ -0.31
NDNFQ8TB73 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 KRT18P43-201ENST00000469825 1281 ntBASIC13.13□□□□□ -0.31
NDNFQ8TB73 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 AC007967.4-201ENST00000614700 386 ntBASIC13.13□□□□□ -0.31
NDNFQ8TB73 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 TRIM80P-201ENST00000455685 2848 ntBASIC13.13□□□□□ -0.31
NDNFQ8TB73 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms