Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AC113367.3-201ENST00000508316 1912 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC099521.3-201ENST00000624251 2938 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC087386.2-201ENST00000623212 4637 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC027612.1-201ENST00000445234 2395 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MTHFR-210ENST00000641407 2387 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MIR769-201ENST00000390225 118 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CYP46A4P-201ENST00000414953 267 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC152010.1-201ENST00000415779 2006 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 E2F3P2-201ENST00000447755 1422 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 RHOQP1-201ENST00000555758 579 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MIR4783-201ENST00000580343 82 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AL162426.1-201ENST00000624141 743 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ACE3P-201ENST00000423435 1973 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 WASH3P-207ENST00000560956 1394 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC011474.4-201ENST00000623523 2076 ntBASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CLDND2Q8NHS1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms