Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 LINC00552-201ENST00000625151 2579 ntBASIC15.57■□□□□ 0.08
BEST2Q8NFU1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 AP002353.1-201ENST00000528257 1599 ntBASIC15.57■□□□□ 0.08
BEST2Q8NFU1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 LINC01165-201ENST00000445190 1623 ntBASIC15.57■□□□□ 0.08
BEST2Q8NFU1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC073150.1-201ENST00000450406 1084 ntBASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC079328.1-201ENST00000560358 952 ntBASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC020922.3-201ENST00000595064 547 ntBASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC016629.1-201ENST00000596579 586 ntBASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC079336.7-201ENST00000623428 1078 ntBASIC15.56■□□□□ 0.08
BEST2Q8NFU1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BEST2Q8NFU1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BEST2Q8NFU1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms