Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 DFFBP1-201ENST00000433250 979 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AC022137.2-201ENST00000503482 481 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AP001063.1-201ENST00000568332 529 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 TMEM261P1-201ENST00000604899 340 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 AC064801.2-201ENST00000625052 1303 ntBASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BBS1Q8NFJ9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AC114271.1-201ENST00000612689 2813 ntBASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 ELK1P1-201ENST00000485699 580 ntBASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AL132655.2-201ENST00000596276 594 ntBASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 BX088702.1-201ENST00000610784 235 ntBASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 NCLP1-201ENST00000445357 1963 ntBASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
BBS1Q8NFJ9 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BBS1Q8NFJ9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BBS1Q8NFJ9 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms