Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC073869.1-201ENST00000415574 2762 ntBASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AC089987.1-201ENST00000551654 2209 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 E2F3P2-201ENST00000447755 1422 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 HOMER2P2-201ENST00000451621 847 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 CICP12-201ENST00000455801 843 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AC100850.1-201ENST00000506768 649 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ALG3P1-201ENST00000508806 1114 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 FAM8A2P-201ENST00000528813 1142 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 MIR4525-201ENST00000580000 75 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ZACNP1-201ENST00000612259 710 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AC133552.6-201ENST00000613406 534 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 AC009542.2-202ENST00000619004 1067 ntBASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.75□□□□□ -0.21
SIMC1Q8NDZ2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 KRT8P28-201ENST00000433288 1390 ntBASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms