Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AP000812.2-201ENST00000538934 718 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC005586.2-201ENST00000563946 837 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC104506.1-201ENST00000609247 429 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC097376.2-205ENST00000610159 5334 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MIR600HG-201ENST00000449175 5984 ntBASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 CHMP1AP1-201ENST00000445563 662 ntBASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TMEM198B-204ENST00000484016 896 ntBASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AC090643.2-201ENST00000623442 2029 ntBASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AHCYP2-201ENST00000430630 1300 ntBASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LSMEM1Q8N8F7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LSMEM1Q8N8F7 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 376.6 ms