Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AL031595.1-201ENST00000623969 4709 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 DPM3-202ENST00000368399 517 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MIR769-201ENST00000390225 118 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AL008707.1-201ENST00000422498 534 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 RBM8B-201ENST00000555532 525 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AC005324.6-201ENST00000587972 613 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AC018529.2-202ENST00000611482 3087 ntBASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC107918.4-201ENST00000641966 3141 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 DMBT1P1-203ENST00000636837 4628 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 KLF2P1-201ENST00000447438 1042 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC005077.2-201ENST00000449786 690 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ACTG1P17-201ENST00000558391 1119 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC068587.8-201ENST00000641239 219 ntBASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms