Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 AC104506.1-201ENST00000609247 429 ntBASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 AC072061.1-201ENST00000569710 2234 ntBASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 PPY2P-201ENST00000582808 702 ntBASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC83Q8IWF9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC006001.1-201ENST00000325130 474 ntBASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AL136301.1-201ENST00000615830 422 ntBASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC83Q8IWF9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms