Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 AC099063.4-201ENST00000641099 1602 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 MEG3_2.1-201ENST00000611456 105 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LINC01783-202ENST00000614408 828 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 BX284668.2-205ENST00000619677 828 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LINC00431-202ENST00000636375 159 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 FRMPD2B-201ENST00000431305 1347 ntBASIC15.43■□□□□ 0.06
RNF135Q8IUD6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF135Q8IUD6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 C8orf49-201ENST00000525043 1968 ntBASIC15.42■□□□□ 0.06
RNF135Q8IUD6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 AL583805.1-201ENST00000391389 531 ntBASIC15.42■□□□□ 0.06
RNF135Q8IUD6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 AP000358.1-201ENST00000456260 156 ntBASIC15.42■□□□□ 0.06
RNF135Q8IUD6 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 MIR5196-201ENST00000578146 115 ntBASIC15.42■□□□□ 0.06
RNF135Q8IUD6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 AC107464.3-201ENST00000609172 737 ntBASIC15.42■□□□□ 0.06
RNF135Q8IUD6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms