Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD4Q5XG99 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD4Q5XG99 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AP000354.1-201ENST00000396982 456 ntBASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC005740.1-201ENST00000515639 522 ntBASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC090136.2-201ENST00000517809 420 ntBASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC013553.1-201ENST00000560906 267 ntBASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD4Q5XG99 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 ODCP-201ENST00000459650 1639 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 OR7E115P-201ENST00000382617 1024 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 KRT18P46-201ENST00000435568 1279 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 VENTXP4-201ENST00000449029 958 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 AC026470.1-201ENST00000478038 846 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 AL109809.1-201ENST00000418979 1367 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms