Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AL583805.1-201ENST00000391389 531 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 RPSAP15-201ENST00000448168 861 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 DUX4L50-201ENST00000455245 715 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 AP000358.1-201ENST00000456260 156 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC114322.1-201ENST00000506771 926 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 C8orf49-201ENST00000525043 1968 ntBASIC15.4■□□□□ 0.06
VARS2Q5ST30 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.4■□□□□ 0.06
VARS2Q5ST30 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARS2Q5ST30 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
VARS2Q5ST30 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 CASC19-229ENST00000641418 1373 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 MAPK10-379ENST00000642013 1385 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AP002414.2-201ENST00000591780 3365 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 NOC2LP1-201ENST00000450578 752 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 SORD2P-201ENST00000558556 1069 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AC103810.10-201ENST00000606504 343 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 AL591471.1-201ENST00000621855 229 ntBASIC15.39■□□□□ 0.05
VARS2Q5ST30 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VARS2Q5ST30 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms