Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 AC004923.1-202ENST00000642106 209 ntBASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 XBP1P1-201ENST00000436573 652 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AC104073.2-201ENST00000453737 312 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AC108725.1-201ENST00000495472 409 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 MIR6752-201ENST00000618442 71 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AC090386.2-201ENST00000623010 1039 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AL008638.5-201ENST00000623814 1298 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 AC092299.1-201ENST00000632679 757 ntBASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN20Q4JDL3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 DPM3-202ENST00000368399 517 ntBASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 USP17L6P-201ENST00000382470 1197 ntBASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC104306.2-201ENST00000451877 341 ntBASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 AC090164.2-201ENST00000611487 516 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms