Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 EIF3FP3-201ENST00000434851 1086 ntBASIC16.35■□□□□ 0.21
TPM4P67936 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM4P67936 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 AC104596.2-201ENST00000512793 793 ntBASIC16.35■□□□□ 0.21
TPM4P67936 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 AC103988.2-201ENST00000561804 725 ntBASIC16.35■□□□□ 0.21
TPM4P67936 RRP7BP-205ENST00000566851 833 ntBASIC16.35■□□□□ 0.21
TPM4P67936 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM4P67936 AC138761.1-201ENST00000584393 385 ntBASIC16.35■□□□□ 0.21
TPM4P67936 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TPM4P67936 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TPM4P67936 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TPM4P67936 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TPM4P67936 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 AC118758.2-201ENST00000614242 2813 ntBASIC16.34■□□□□ 0.21
TPM4P67936 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM4P67936 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.34■□□□□ 0.21
TPM4P67936 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 AC009407.1-201ENST00000568958 598 ntBASIC16.34■□□□□ 0.21
TPM4P67936 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM4P67936 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TPM4P67936 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TPM4P67936 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM4P67936 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 AGAP10P-201ENST00000454844 2418 ntBASIC16.34■□□□□ 0.21
TPM4P67936 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM4P67936 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM4P67936 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM4P67936 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TPM4P67936 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
TPM4P67936 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TPM4P67936 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TPM4P67936 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM4P67936 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TPM4P67936 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 AC072061.1-201ENST00000569710 2234 ntBASIC16.33■□□□□ 0.2
TPM4P67936 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM4P67936 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.33■□□□□ 0.2
TPM4P67936 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms