Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S1P61966 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 USP17L6P-201ENST00000382470 1197 ntBASIC14.57□□□□□ -0.08
AP1S1P61966 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.57□□□□□ -0.08
AP1S1P61966 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.57□□□□□ -0.08
AP1S1P61966 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 AC090857.1-201ENST00000527400 390 ntBASIC14.57□□□□□ -0.08
AP1S1P61966 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S1P61966 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.57□□□□□ -0.08
AP1S1P61966 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S1P61966 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S1P61966 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP1S1P61966 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.57□□□□□ -0.08
AP1S1P61966 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 AC023908.3-201ENST00000564211 3047 ntBASIC14.57□□□□□ -0.08
AP1S1P61966 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
AP1S1P61966 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP1S1P61966 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 AP002353.1-201ENST00000528257 1599 ntBASIC14.56□□□□□ -0.08
AP1S1P61966 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 AC005089.1-201ENST00000619486 2241 ntBASIC14.56□□□□□ -0.08
AP1S1P61966 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP1S1P61966 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.56□□□□□ -0.08
AP1S1P61966 MIR769-201ENST00000390225 118 ntBASIC14.56□□□□□ -0.08
AP1S1P61966 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 AC092580.1-201ENST00000433998 658 ntBASIC14.56□□□□□ -0.08
AP1S1P61966 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.56□□□□□ -0.08
AP1S1P61966 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.56□□□□□ -0.08
AP1S1P61966 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.56□□□□□ -0.08
AP1S1P61966 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.56□□□□□ -0.08
AP1S1P61966 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.56□□□□□ -0.08
AP1S1P61966 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.56□□□□□ -0.08
AP1S1P61966 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.56□□□□□ -0.08
AP1S1P61966 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
AP1S1P61966 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 TCAM1P-207ENST00000485295 1537 ntBASIC14.56□□□□□ -0.08
AP1S1P61966 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S1P61966 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S1P61966 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms